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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_0983Amino acid ABC transporter, ATP-binding protein SP0709; Identified by match to protein family HMM PF00005. (252 aa)    
Predicted Functional Partners:
SGO_0984
Amino acid ABC transporter, permease protein SP0710; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.986
SGO_0985
Amino acid ABC transporter, permease protein SP0711; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.983
SGO_1037
Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.964
SGO_0982
Amino acid ABC transporter, amino acid-binding protein; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.962
SGO_1727
Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.958
SGO_0578
Amino acid ABC transporter permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.915
SGO_1750
ABC-type multidrug/protein/lipid transport system, ATPase component; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
     
0.883
SGO_0457
ABC transporter, substrate-binding protein SP0148; Identified by match to protein family HMM PF00497.
 
 
 0.756
SGO_0752
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF02687.
 
      0.693
SGO_1418
ATP-binding cassette transporter-like protein; Identified by match to protein family HMM PF02687.
 
      0.541
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.