Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SGO_0988 | SGO_0989 | SGO_0988 | SGO_0989 | Probable transcription regulator-like protein lin0464, putative; Identified by match to protein family HMM PF08279. | Hypothetical protein; Identified by Glimmer2; putative. | 0.548 |
| SGO_0988 | metK | SGO_0988 | SGO_0987 | Probable transcription regulator-like protein lin0464, putative; Identified by match to protein family HMM PF08279. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.592 |
| SGO_0989 | SGO_0988 | SGO_0989 | SGO_0988 | Hypothetical protein; Identified by Glimmer2; putative. | Probable transcription regulator-like protein lin0464, putative; Identified by match to protein family HMM PF08279. | 0.548 |
| SGO_0989 | SGO_0990 | SGO_0989 | SGO_0990 | Hypothetical protein; Identified by Glimmer2; putative. | Transporter, major facilitator family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.430 |
| SGO_0989 | metK | SGO_0989 | SGO_0987 | Hypothetical protein; Identified by Glimmer2; putative. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.431 |
| SGO_0990 | SGO_0989 | SGO_0990 | SGO_0989 | Transporter, major facilitator family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Hypothetical protein; Identified by Glimmer2; putative. | 0.430 |
| metK | SGO_0988 | SGO_0987 | SGO_0988 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Probable transcription regulator-like protein lin0464, putative; Identified by match to protein family HMM PF08279. | 0.592 |
| metK | SGO_0989 | SGO_0987 | SGO_0989 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Hypothetical protein; Identified by Glimmer2; putative. | 0.431 |