SGO_1198 protein (Streptococcus gordonii) - STRING interaction network

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Score

SGO_1198

DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732. (280 aa)

Predicted Functional Partners:

topA

0.938

recA

0.838

celB

0.810

comFC

0.781

recJ

0.694

SGO_0664

0.669

comYA

0.644

ssb-1

0.611

ssb

0.592

SGO_1199

0.590

Your Current Organism:

Streptococcus gordonii

NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGO_0664	SGO_1198	SGO_0664	SGO_1198	Type 4 prepilin peptidase; Identified by match to protein family HMM PF01478; match to protein family HMM PF06750.	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.669
SGO_0664	celB	SGO_0664	SGO_1601	Type 4 prepilin peptidase; Identified by match to protein family HMM PF01478; match to protein family HMM PF06750.	DNA internalization-related competence protein celB; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.	0.698
SGO_0664	comYA	SGO_0664	SGO_1924	Type 4 prepilin peptidase; Identified by match to protein family HMM PF01478; match to protein family HMM PF06750.	Competence protein comYA; Identified by match to protein family HMM PF00437.	0.875
SGO_0664	topA	SGO_0664	SGO_1197	Type 4 prepilin peptidase; Identified by match to protein family HMM PF01478; match to protein family HMM PF06750.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.481
SGO_1198	SGO_0664	SGO_1198	SGO_0664	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Type 4 prepilin peptidase; Identified by match to protein family HMM PF01478; match to protein family HMM PF06750.	0.669
SGO_1198	SGO_1199	SGO_1198	SGO_1199	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Acetyltransferase, CysE/LacA/LpxA/NodL family; Identified by match to protein family HMM PF00132.	0.590
SGO_1198	celB	SGO_1198	SGO_1601	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	DNA internalization-related competence protein celB; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.	0.810
SGO_1198	comFC	SGO_1198	SGO_0609	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Competence protein ComFC.	0.781
SGO_1198	comYA	SGO_1198	SGO_1924	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Competence protein comYA; Identified by match to protein family HMM PF00437.	0.644
SGO_1198	recA	SGO_1198	SGO_2045	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.838
SGO_1198	recJ	SGO_1198	SGO_1000	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644.	0.694
SGO_1198	ssb	SGO_1198	SGO_1902	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.592
SGO_1198	ssb-1	SGO_1198	SGO_1880	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.611
SGO_1198	topA	SGO_1198	SGO_1197	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.938
SGO_1199	SGO_1198	SGO_1199	SGO_1198	Acetyltransferase, CysE/LacA/LpxA/NodL family; Identified by match to protein family HMM PF00132.	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.590
SGO_1199	topA	SGO_1199	SGO_1197	Acetyltransferase, CysE/LacA/LpxA/NodL family; Identified by match to protein family HMM PF00132.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.663
celB	SGO_0664	SGO_1601	SGO_0664	DNA internalization-related competence protein celB; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.	Type 4 prepilin peptidase; Identified by match to protein family HMM PF01478; match to protein family HMM PF06750.	0.698
celB	SGO_1198	SGO_1601	SGO_1198	DNA internalization-related competence protein celB; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.	DNA processing Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.810
celB	comFC	SGO_1601	SGO_0609	DNA internalization-related competence protein celB; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.	Competence protein ComFC.	0.784
celB	comYA	SGO_1601	SGO_1924	DNA internalization-related competence protein celB; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.	Competence protein comYA; Identified by match to protein family HMM PF00437.	0.754

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