dnaE protein (Streptococcus gordonii) - STRING interaction network

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Score

dnaE

DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594. (1033 aa)

Predicted Functional Partners:

dnaX

0.999

dnaN

0.998

SGO_1538

0.998

SGO_1600

0.998

polC

0.918

ssb-1

0.858

ssb

0.849

dnaG

0.838

pcrA

0.801

polI

0.737

Your Current Organism:

Streptococcus gordonii

NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGO_1538	SGO_1600	SGO_1538	SGO_1600	DNA-directed DNA polymerase III, delta'' chain.	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	0.998
SGO_1538	dnaE	SGO_1538	SGO_1341	DNA-directed DNA polymerase III, delta'' chain.	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.998
SGO_1538	dnaN	SGO_1538	SGO_0002	DNA-directed DNA polymerase III, delta'' chain.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.999
SGO_1538	dnaX	SGO_1538	SGO_0901	DNA-directed DNA polymerase III, delta'' chain.	DNA-directed DNA polymerase III; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.998
SGO_1538	polC	SGO_1538	SGO_1847	DNA-directed DNA polymerase III, delta'' chain.	DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.914
SGO_1538	polI	SGO_1538	SGO_0145	DNA-directed DNA polymerase III, delta'' chain.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.949
SGO_1600	SGO_1538	SGO_1600	SGO_1538	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	DNA-directed DNA polymerase III, delta'' chain.	0.998
SGO_1600	dnaE	SGO_1600	SGO_1341	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.998
SGO_1600	dnaN	SGO_1600	SGO_0002	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.999
SGO_1600	dnaX	SGO_1600	SGO_0901	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	DNA-directed DNA polymerase III; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.998
SGO_1600	polC	SGO_1600	SGO_1847	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.922
SGO_1600	polI	SGO_1600	SGO_0145	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.706
dnaE	SGO_1538	SGO_1341	SGO_1538	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA-directed DNA polymerase III, delta'' chain.	0.998
dnaE	SGO_1600	SGO_1341	SGO_1600	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, delta chain; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.	0.998
dnaE	dnaG	SGO_1341	SGO_1274	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.838
dnaE	dnaN	SGO_1341	SGO_0002	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.998
dnaE	dnaX	SGO_1341	SGO_0901	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA-directed DNA polymerase III; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.999
dnaE	pcrA	SGO_1341	SGO_1336	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073.	0.801
dnaE	polC	SGO_1341	SGO_1847	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.918
dnaE	polI	SGO_1341	SGO_0145	DNA-directed DNA polymerase III alpha chain; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.737

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