Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SGO_1472Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (247 aa)    
Predicted Functional Partners:
Mga
Mga-like regulatory protein; Identified by match to protein family HMM PF05043; match to protein family HMM PF08270; match to protein family HMM PF08279; match to protein family HMM PF08280.
   
    0.933
SGO_1471
Hypothetical protein; Identified by Glimmer2; putative.
       0.854
SGO_1473
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.833
SGO_1474
Conserved hypothetical protein.
       0.833
SGO_1470
Conserved hypothetical protein; Identified by match to protein family HMM PF06171.
       0.777
rgg
Transcriptional regulator Rgg; Regulates the expression of glucosyltransferase (gtfG).
   
    0.561
rggC
Putative transcriptional regulator RggC; Identified by match to protein family HMM TIGR01716.
   
    0.561
SGO_0335
Conserved hypothetical protein.
  
     0.533
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
       0.482
SGO_1468
Identified by match to protein family HMM PF00293.
       0.480
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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