STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacG6-phospho-beta-galactosidase; Identified by match to protein family HMM PF00232; match to protein family HMM TIGR01233; Belongs to the glycosyl hydrolase 1 family (468 aa)    
Predicted Functional Partners:
lacE
PTS system, lactose-specific IIBC component; Identified by match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00394; match to protein family HMM TIGR00410; match to protein family HMM TIGR00853
 
 
 0.997
lacF
PTS system, lactose-specific IIa component; Identified by match to protein family HMM PF02255; match to protein family HMM TIGR00823
 
 
 0.994
lacB-2
Galactose-6-phosphate isomerase subunit LacB; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01119
  
 
 0.971
lacB-1
Galactose-6-phosphate isomerase subunit LacB; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01119
  
 
 0.960
lacA-1
Galactose-6-phosphate isomerase subunit LacA; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01118
  
 
 0.958
lacA-2
Galactose-6-phosphate isomerase subunit LacA; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01118
   
 
 0.942
lacD-2
Tagatose 1,6-diphosphate aldolase; Identified by match to protein family HMM PF01791; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family
  
  
 0.873
lacD-1
Tagatose 1,6-diphosphate aldolase; Identified by match to protein family HMM PF01791; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family
  
  
 0.826
lacC
Tagatose-6-phosphate kinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR01231; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family. LacC subfamily
  
  
 0.804
lacC-2
Tagatose-6-phosphate kinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR01231; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family. LacC subfamily
  
  
 0.730
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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