STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_1598Conserved hypothetical protein. (357 aa)    
Predicted Functional Partners:
zmpC
Zinc metalloproteinase C; Identified by match to protein family HMM PF04650; match to protein family HMM PF07501; match to protein family HMM PF07554; match to protein family HMM PF07580; match to protein family HMM PF07581; match to protein family HMM TIGR01168.
  
     0.714
SGO_0945
ABC transporter permease protein; Identified by match to protein family HMM PF02687.
  
     0.710
srtB
Identified by match to protein family HMM TIGR03064.
  
     0.684
SGO_1832
Conserved hypothetical protein.
  
     0.641
cadD
Cadmium resistance protein; Identified by match to protein family HMM PF03596; match to protein family HMM TIGR00779.
  
     0.604
SGO_1860
5'-nucleotidase, lipoprotein e(P4) family; Identified by match to protein family HMM PF03767; match to protein family HMM TIGR01533.
  
     0.586
sodA
Manganese-dependent superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.585
SGO_1820
Conserved hypothetical protein.
  
     0.560
SGO_0018
Conserved domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF06737.
  
     0.541
SGO_1595
Integral membrane protein; Identified by match to protein family HMM PF07853.
 
     0.532
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.