SGO_1716 protein (Streptococcus gordonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SGO_1716

Oligopeptide binding protein; Identified by match to protein family HMM PF00496. (653 aa)

Predicted Functional Partners:

hppB

0.985

amiE

0.984

amiD

0.982

amiF

0.980

hppH

0.942

hppA

0.902

hppG

0.901

SGO_1727

0.517

SGO_1037

0.449

pbp3

0.433

Your Current Organism:

Streptococcus gordonii

NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGO_1037	SGO_1716	SGO_1037	SGO_1716	Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	0.449
SGO_1037	SGO_1727	SGO_1037	SGO_1727	Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.807
SGO_1037	hppA	SGO_1037	SGO_1712	Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Oligopeptide-binding lipoprotein; May be involved in the expression of cell surface properties important for colonization of the human oral cavity. It may also be involved in uptake processes; Belongs to the bacterial solute-binding protein 5 family.	0.449
SGO_1037	hppG	SGO_1037	SGO_1713	Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Oligopeptide-binding lipoprotein; Identified by match to protein family HMM PF00496.	0.449
SGO_1716	SGO_1037	SGO_1716	SGO_1037	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.449
SGO_1716	SGO_1727	SGO_1716	SGO_1727	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.517
SGO_1716	amiD	SGO_1716	SGO_1710	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Oligopeptide transport system permease protein; Identified by match to protein family HMM PF00528.	0.982
SGO_1716	amiE	SGO_1716	SGO_1709	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Oligopeptide transport ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.984
SGO_1716	amiF	SGO_1716	SGO_1708	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Oligopeptide transport ATP-binding protein amiF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; Belongs to the ABC transporter superfamily.	0.980
SGO_1716	hppA	SGO_1716	SGO_1712	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Oligopeptide-binding lipoprotein; May be involved in the expression of cell surface properties important for colonization of the human oral cavity. It may also be involved in uptake processes; Belongs to the bacterial solute-binding protein 5 family.	0.902
SGO_1716	hppB	SGO_1716	SGO_1711	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	0.985
SGO_1716	hppG	SGO_1716	SGO_1713	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Oligopeptide-binding lipoprotein; Identified by match to protein family HMM PF00496.	0.901
SGO_1716	hppH	SGO_1716	SGO_1715	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Oligopeptide-binding lipoprotein; Identified by match to protein family HMM PF00496.	0.942
SGO_1716	pbp3	SGO_1716	SGO_1717	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	Penicillin-binding protein 3; Identified by match to protein family HMM PF00768; match to protein family HMM PF07943; Belongs to the peptidase S11 family.	0.433
SGO_1727	SGO_1037	SGO_1727	SGO_1037	Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Glutamine ABC transporter permease and substrate binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.807
SGO_1727	SGO_1716	SGO_1727	SGO_1716	Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	0.517
SGO_1727	hppA	SGO_1727	SGO_1712	Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Oligopeptide-binding lipoprotein; May be involved in the expression of cell surface properties important for colonization of the human oral cavity. It may also be involved in uptake processes; Belongs to the bacterial solute-binding protein 5 family.	0.512
SGO_1727	hppB	SGO_1727	SGO_1711	Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Oligopeptide transport system permease; Identified by match to protein family HMM PF00528.	0.427
SGO_1727	hppG	SGO_1727	SGO_1713	Amino acid ABC transporter, amino acid-binding/permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Oligopeptide-binding lipoprotein; Identified by match to protein family HMM PF00496.	0.518
amiD	SGO_1716	SGO_1710	SGO_1716	Oligopeptide transport system permease protein; Identified by match to protein family HMM PF00528.	Oligopeptide binding protein; Identified by match to protein family HMM PF00496.	0.982

page 1 of 4

Server load: low (34%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About