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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scaAABC transporter membrane-spanning permease - manganese transport; Identified by match to protein family HMM PF00950. (278 aa)    
Predicted Functional Partners:
troB
Manganese ABC transporter, ATP-binding protein SP1648; Identified by match to protein family HMM PF00005.
 
 0.999
SGO_1802
Metal ABC transporter substrate-binding lipoprotein precursor; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
adcA
Metal-binding (Mn) permease precursor, lipoprotein; Identified by match to protein family HMM PF01297; match to protein family HMM PF09223; Belongs to the bacterial solute-binding protein 9 family.
  
 0.993
adcC
ATP-binding protein, Mn; Identified by similarity to GB:AAO43168.1; match to protein family HMM PF00005.
 
 
 0.961
SGO_1314
Metal binding lipoprotein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.881
mntH
Proton-dependent manganese transporter group C beta 2; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.839
SGO_1799
Identified by match to protein family HMM PF01431; match to protein family HMM PF05649.
     
 0.813
scaR
ScaR Manganese-dependent regulator of scaCBA; Identified by similarity to GB:AAF25184.1; match to protein family HMM PF01047; match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023.
 
  
 0.706
SGO_1506
Membrane protein, putative.
   
  
 0.648
sspB
Identified by match to protein family HMM PF00746; match to protein family HMM PF06696; match to protein family HMM PF08363; match to protein family HMM TIGR01167.
     
 0.629
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.