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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_1827Conserved hypothetical protein. (156 aa)    
Predicted Functional Partners:
SGO_1825
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.800
mutT
Identified by match to protein family HMM PF00293.
       0.800
SGO_0438
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.634
SGO_2107
General stress protein GSP-781; Identified by match to protein family HMM PF05257.
  
     0.633
SGO_1828
ATPase, AAA family; Identified by match to protein family HMM PF00004.
       0.604
SGO_1823
Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.548
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.548
rgg
Transcriptional regulator Rgg; Regulates the expression of glucosyltransferase (gtfG).
  
     0.538
SGO_0029
Conserved hypothetical protein; Identified by match to protein family HMM PF06257.
  
     0.533
SGO_0685
Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
  
     0.530
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.