Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SGO_2018Extrracellular polysaccharide polymerase putative. (439 aa)    
Predicted Functional Partners:
SGO_2015
Possible polysaccharide transport protein.
 
     0.876
licD
licD3 protein; Identified by match to protein family HMM PF04991.
       0.817
SGO_2016
Nucleotide sugar dehydratase, putative; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
       0.816
tarI
Nucleotidyl transferase, putative; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
       0.816
SGO_2023
Galactosyltransferase; Identified by match to protein family HMM PF02397.
 
   
 0.754
wzd
Polysaccharide export protein, MPA1 family; Identified by match to protein family HMM PF02706.
 
   
 0.669
SGO_2022
UDP-glucose 4-epimerase BH3715; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
 
     0.657
wzh
wzh/Putative phosphotyrosine-protein phosphatase; Identified by match to protein family HMM PF02811.
 
   
 0.648
SGO_2024
Extracellular polysaccharide biosynthesis; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
     
 0.644
wze
Putative autophosphorylating protein tyrosine kinase; Identified by match to protein family HMM TIGR01007.
     
 0.642
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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