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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO_2023Galactosyltransferase; Identified by match to protein family HMM PF02397. (201 aa)    
Predicted Functional Partners:
SGO_2022
UDP-glucose 4-epimerase BH3715; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
 0.989
SGO_2024
Extracellular polysaccharide biosynthesis; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
 
  
 0.957
wze
Putative autophosphorylating protein tyrosine kinase; Identified by match to protein family HMM TIGR01007.
 
  
 0.947
wzd
Polysaccharide export protein, MPA1 family; Identified by match to protein family HMM PF02706.
 
  
 0.928
SGO_2021
Extracellular polysaccharide glycosyltransferase; Identified by match to protein family HMM PF00535.
 
  
 0.831
wzh
wzh/Putative phosphotyrosine-protein phosphatase; Identified by match to protein family HMM PF02811.
 
  
 0.823
SGO_2020
Glycosyltransferase; Identified by match to protein family HMM PF00535.
 
  
 0.820
SGO_2015
Possible polysaccharide transport protein.
 
  
 0.796
SGO_2016
Nucleotide sugar dehydratase, putative; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
  
 0.742
wzg
Transcriptional regulator; Identified by match to protein family HMM PF02916; match to protein family HMM PF03816; match to protein family HMM TIGR00350.
     
 0.681
Your Current Organism:
Streptococcus gordonii
NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.