comC protein (Streptococcus gordonii) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

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Score

comC

Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847. (50 aa)

Predicted Functional Partners:

comD

0.911

comE

0.885

comX

0.625

comB

0.624

comYA

0.578

comYD

0.547

SGO_1575

0.468

rlmH

0.410

Your Current Organism:

Streptococcus gordonii

NCBI taxonomy Id: 467705
Other names: S. gordonii str. Challis substr. CH1, Streptococcus gordonii ATCC 35105, Streptococcus gordonii str. Challis substr. CH1, Streptococcus gordonii str. Challis substr. DL1, Streptococcus gordonii str. Challis substr. V288

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SGO_1575	comB	SGO_1575	SGO_2096	Competence protein CoiA; Identified by match to protein family HMM PF06054.	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	0.570
SGO_1575	comC	SGO_1575	SGO_2147	Competence protein CoiA; Identified by match to protein family HMM PF06054.	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	0.468
SGO_1575	comD	SGO_1575	SGO_2146	Competence protein CoiA; Identified by match to protein family HMM PF06054.	Histidine protein kinase ComD; Identified by match to protein family HMM PF02518.	0.467
SGO_1575	comX	SGO_1575	SGO_2095	Competence protein CoiA; Identified by match to protein family HMM PF06054.	ComX.	0.623
comB	SGO_1575	SGO_2096	SGO_1575	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	Competence protein CoiA; Identified by match to protein family HMM PF06054.	0.570
comB	comC	SGO_2096	SGO_2147	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	0.624
comB	comD	SGO_2096	SGO_2146	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	Histidine protein kinase ComD; Identified by match to protein family HMM PF02518.	0.608
comB	comE	SGO_2096	SGO_2145	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	Competence response regulator ComE; Identified by match to protein family HMM PF00072; match to protein family HMM PF04397.	0.659
comB	comX	SGO_2096	SGO_2095	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	ComX.	0.580
comC	SGO_1575	SGO_2147	SGO_1575	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	Competence protein CoiA; Identified by match to protein family HMM PF06054.	0.468
comC	comB	SGO_2147	SGO_2096	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	0.624
comC	comD	SGO_2147	SGO_2146	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	Histidine protein kinase ComD; Identified by match to protein family HMM PF02518.	0.911
comC	comE	SGO_2147	SGO_2145	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	Competence response regulator ComE; Identified by match to protein family HMM PF00072; match to protein family HMM PF04397.	0.885
comC	comX	SGO_2147	SGO_2095	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	ComX.	0.625
comC	comYA	SGO_2147	SGO_1924	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	Competence protein comYA; Identified by match to protein family HMM PF00437.	0.578
comC	comYD	SGO_2147	SGO_1921	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	ComYD.	0.547
comC	rlmH	SGO_2147	SGO_2149	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	Conserved hypothetical protein TIGR00246; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.410
comD	SGO_1575	SGO_2146	SGO_1575	Histidine protein kinase ComD; Identified by match to protein family HMM PF02518.	Competence protein CoiA; Identified by match to protein family HMM PF06054.	0.467
comD	comB	SGO_2146	SGO_2096	Histidine protein kinase ComD; Identified by match to protein family HMM PF02518.	Transport protein ComB; Identified by match to protein family HMM TIGR01000.	0.608
comD	comC	SGO_2146	SGO_2147	Histidine protein kinase ComD; Identified by match to protein family HMM PF02518.	Competence factor-related protein ComC; Identified by match to protein family HMM PF03047; match to protein family HMM TIGR01847.	0.911

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