STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF87341.1Outer membrane receptor for ferrienterochelin and colicins. (758 aa)    
Predicted Functional Partners:
SHF87317.1
Protein of unknown function, DUF255.
 
     0.568
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
     
 0.553
SHG32598.1
Hypothetical protein.
  
 
   0.547
SHF87390.1
Lysophospholipase L1.
       0.524
SHF87411.1
Iron (metal) dependent repressor, DtxR family.
       0.513
SHF69530.1
TonB protein C-terminal.
  
   0.468
SHG78507.1
HYR domain-containing protein.
  
 
   0.453
SHG71604.1
Hypothetical protein.
  
 
   0.453
SHF68698.1
Outer membrane transport energization protein TonB.
   
 
 0.420
SHH00702.1
Protein TonB.
   
 
 0.420
Your Current Organism:
Flavobacterium fluvii
NCBI taxonomy Id: 468056
Other names: DSM 19978, F. fluvii, Flavobacterium fluvii Lee et al. 2010, Flavobacterium sp. H7, KACC 12818, strain H7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.