STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF93555.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
SHF93527.1
Pyridine nucleotide-disulphide oxidoreductase.
 
     0.834
SHG72117.1
LETM1-like protein.
  
     0.761
SHG18250.1
Hypothetical protein.
  
     0.750
SHG32625.1
Hypothetical protein.
  
     0.740
SHG50112.1
Hypothetical protein.
  
     0.740
SHG88294.1
Hypothetical protein.
  
     0.740
SHF96545.1
2TM domain-containing protein.
  
     0.715
SHG16333.1
Hypothetical protein.
  
     0.701
SHF93414.1
Hypothetical protein.
  
     0.699
SHF85348.1
Hypothetical protein.
  
     0.692
Your Current Organism:
Flavobacterium fluvii
NCBI taxonomy Id: 468056
Other names: DSM 19978, F. fluvii, Flavobacterium fluvii Lee et al. 2010, Flavobacterium sp. H7, KACC 12818, strain H7
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.