STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_05643BTB/POZ domain-containing protein kctd15. (549 aa)    
Predicted Functional Partners:
FGIG_01036
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.937
FGIG_03053
Transcription factor AP-2-epsilon.
   
 0.927
FGIG_01459
DUF3504 domain-containing protein.
   
 0.750
FGIG_02813
Putative e3 ubiquitin ligase cullin 2 component; Belongs to the cullin family.
    
 0.710
FGIG_04315
Uncharacterized protein.
    
 0.671
FGIG_09784
Cullin-1; Belongs to the cullin family.
    
 0.671
FGIG_06210
Kelch protein 10.
    
  0.632
FGIG_07646
BACK domain-containing protein.
    
  0.632
FGIG_06516
Sulfite oxidase mitochondrial.
      
 0.630
FGIG_11395
Activating transcription factor 7-interacting protein 2.
      
 0.588
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.