STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_06867Methyltransferase NSUN7. (503 aa)    
Predicted Functional Partners:
FGIG_10188
Methionyl-tRNA formyltransferase mitochondrial.
  
  
 0.817
FGIG_06288
rRNA-processing protein EBP2.
   
 
 0.770
FGIG_00519
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.763
FGIG_08555
RRM domain-containing protein.
   
 
 0.756
FGIG_08288
Ribosome biolocus tagsis protein wdr12.
   
 
 0.743
FGIG_11774
Nucleolar complex protein 3.
   
 
 0.743
FGIG_07628
Putative 60s ribosomal protein L24.
   
 
 0.734
FGIG_06673
Ribosome production factor 1.
   
 
 0.731
FGIG_09127
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.724
FGIG_11264
Ribosome biogenesis protein n.
   
 
 0.722
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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