STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00437Iroquois-class homeodomain protein IRX-1. (388 aa)    
Predicted Functional Partners:
FGIG_00323
Protein tiptop.
    
 0.640
FGIG_04462
Pre-B-cell leukemia transcription factor.
    
 0.611
FGIG_00483
Irx.
    
 0.611
FGIG_04928
Homeobox protein extradenticle.
    
 0.611
FGIG_04929
Putative erythrocyte membrane protein.
    
 0.611
FGIG_01211
Serum response factor.
   
 
 0.595
FGIG_08394
Homeobox protein PKNOX2.
     
 0.444
FGIG_05346
Homeobox protein PKNOX1.
     
 0.444
FGIG_03163
Mothers against decapentaplegic homolog.
    
 0.438
FGIG_12504
Histone deacetylase 8.
    
 0.436
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.