FGIG_09017 protein (Fasciola gigantica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FGIG_09017

Dynamin GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (696 aa)

Predicted Functional Partners:

FGIG_00327

0.994

FGIG_00328

0.994

FGIG_11175

0.908

FGIG_08779

0.908

FGIG_06538

0.858

FGIG_05427

0.857

FGIG_00427

0.844

FGIG_02390

0.822

FGIG_00253

0.798

FGIG_08337

0.788

Your Current Organism:

Fasciola gigantica

NCBI taxonomy Id: 46835
Other names: F. gigantica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FGIG_00253	FGIG_00327	A0A504YP08	A0A504YTZ7	Protein kinase domain-containing protein.	Cyclin-G-associated kinase.	0.639
FGIG_00253	FGIG_00328	A0A504YP08	A0A504YUX7	Protein kinase domain-containing protein.	Cyclin G-associated kinase.	0.639
FGIG_00253	FGIG_06538	A0A504YP08	A0A504YTH2	Protein kinase domain-containing protein.	Mitochondrial fission 1 protein.	0.622
FGIG_00253	FGIG_09017	A0A504YP08	A0A504Y8V0	Protein kinase domain-containing protein.	Dynamin GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.798
FGIG_00327	FGIG_00253	A0A504YTZ7	A0A504YP08	Cyclin-G-associated kinase.	Protein kinase domain-containing protein.	0.639
FGIG_00327	FGIG_00328	A0A504YTZ7	A0A504YUX7	Cyclin-G-associated kinase.	Cyclin G-associated kinase.	0.999
FGIG_00327	FGIG_00427	A0A504YTZ7	A0A504YCG6	Cyclin-G-associated kinase.	Uncharacterized protein.	0.667
FGIG_00327	FGIG_02390	A0A504YTZ7	A0A504YEU6	Cyclin-G-associated kinase.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.999
FGIG_00327	FGIG_05427	A0A504YTZ7	A0A504Y5I4	Cyclin-G-associated kinase.	Endophilin-A.	0.987
FGIG_00327	FGIG_06538	A0A504YTZ7	A0A504YTH2	Cyclin-G-associated kinase.	Mitochondrial fission 1 protein.	0.544
FGIG_00327	FGIG_08779	A0A504YTZ7	A0A504Z4A9	Cyclin-G-associated kinase.	Uncharacterized protein.	0.834
FGIG_00327	FGIG_09017	A0A504YTZ7	A0A504Y8V0	Cyclin-G-associated kinase.	Dynamin GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.994
FGIG_00327	FGIG_11175	A0A504YTZ7	A0A504YDZ2	Cyclin-G-associated kinase.	Intersectin-1.	0.834
FGIG_00328	FGIG_00253	A0A504YUX7	A0A504YP08	Cyclin G-associated kinase.	Protein kinase domain-containing protein.	0.639
FGIG_00328	FGIG_00327	A0A504YUX7	A0A504YTZ7	Cyclin G-associated kinase.	Cyclin-G-associated kinase.	0.999
FGIG_00328	FGIG_00427	A0A504YUX7	A0A504YCG6	Cyclin G-associated kinase.	Uncharacterized protein.	0.667
FGIG_00328	FGIG_02390	A0A504YUX7	A0A504YEU6	Cyclin G-associated kinase.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.999
FGIG_00328	FGIG_05427	A0A504YUX7	A0A504Y5I4	Cyclin G-associated kinase.	Endophilin-A.	0.987
FGIG_00328	FGIG_06538	A0A504YUX7	A0A504YTH2	Cyclin G-associated kinase.	Mitochondrial fission 1 protein.	0.544
FGIG_00328	FGIG_08779	A0A504YUX7	A0A504Z4A9	Cyclin G-associated kinase.	Uncharacterized protein.	0.834