STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_10151Lysine specific histone demethylase 1A. (164 aa)    
Predicted Functional Partners:
FGIG_08577
REST corepressor.
    
 0.817
FGIG_10497
REST corepressor 3.
    
 0.817
FGIG_01650
UPF0551 protein C8orf38 mitochondrial.
   
 
 0.772
FGIG_09082
Aldehyde dehydrogenase (NAD(P)+).
    
 0.755
FGIG_06357
Amine oxidase.
   
 
 0.748
FGIG_09063
Nitrilase and fragile histidine triad fusion protein NitFhit.
  
 
 0.747
FGIG_04749
Chromodomain-helicase-DNA-binding protein Mi-2.
    
 0.736
FGIG_06174
Chromodomain-helicase-DNA-binding protein 3.
    
 0.736
FGIG_12504
Histone deacetylase 8.
   
 0.712
FGIG_01344
Histone deacetylase 8.
   
 0.712
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.