STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_09752Uncharacterized protein. (610 aa)    
Predicted Functional Partners:
FGIG_07871
Small COPII coat GTPase; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.994
FGIG_11743
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.875
FGIG_11663
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.875
FGIG_12282
Putative NADH-ubiquinone oxidoreductase fe-s protein 2 (Ndufs2).
     
 0.830
FGIG_02188
Rgpr.
   
 
 0.744
FGIG_08251
Translocation protein SEC63.
   
 
 0.741
FGIG_06204
Transmembrane emp24 domain-containing protein bai.
    
 0.734
FGIG_10088
Protein transport protein Sec24c.
   
 0.718
FGIG_12021
Protein transport protein Sec24C.
   
 0.718
FGIG_04821
Protein transport protein sec24c.
   
 0.718
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.