STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_11910PXA domain-containing protein. (131 aa)    
Predicted Functional Partners:
FGIG_09471
Sorting nexin-13.
 
      0.774
FGIG_03427
Vesicle transport through interaction with.
   
 
 0.556
FGIG_03672
Sorting nexin-14.
   
 
 0.553
FGIG_02100
Synaptobrevin like protein YKT6; Belongs to the synaptobrevin family.
     
 0.545
FGIG_06727
RAD50-interacting protein 1.
   
 
  0.544
FGIG_08046
Vesicle transport protein USE1.
     
 0.522
FGIG_00349
Kinesin protein KIF13B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.500
FGIG_07584
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.472
FGIG_03586
Uncharacterized protein.
    
 0.472
FGIG_07272
Uncharacterized protein.
    
 0.472
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.