STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_10703Tetraspanin. (275 aa)    
Predicted Functional Partners:
FGIG_01269
Integrin beta.
    
 0.749
FGIG_01848
Calponin-homology (CH) domain-containing protein.
   
 
 0.748
FGIG_01267
Integrin.
    
 0.673
FGIG_06105
Integrin alpha-5.
    
 0.673
FGIG_01266
Integrin.
    
 0.673
FGIG_06338
Integrin alpha ina-1; Belongs to the integrin alpha chain family.
    
 0.673
FGIG_06106
Integrin alpha 3.
    
 0.673
FGIG_00104
Multiple epidermal growth factor domains protein 6.
     
 0.571
FGIG_00105
Multiple epidermal growth factor domains protein 6.
     
 0.565
FGIG_11158
Uncharacterized protein.
     
 0.559
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.