STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_12007Protein lin-52. (126 aa)    
Predicted Functional Partners:
FGIG_05724
Lin-9.
    
 0.994
FGIG_11918
Antolefinin Antolefinine.
    
 0.992
FGIG_09487
HTH myb-type domain-containing protein.
    
 0.989
FGIG_07316
Putative retinoblastoma protein.
    
 0.988
FGIG_07728
Putative lin-9.
    
 0.981
FGIG_07917
Uncharacterized protein.
    
 0.981
FGIG_10688
Retinoblastoma binding protein 4.
   
 0.964
FGIG_03044
Histone-binding protein RBBP4.
   
 0.923
FGIG_03254
Transcription factor Dp 1.
    
 0.903
FGIG_11710
Protein lin-54.
    
 0.900
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.