STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_07944Lysyl-tRNA synthetase. (175 aa)    
Predicted Functional Partners:
FGIG_02186
Glutamyl tRNA synthetase cytoplasmic.
  
 0.999
FGIG_04868
Methionyl tRNA synthetase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.998
FGIG_01957
Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1.
  
 0.997
FGIG_10837
Valyl-tRNA synthetase.
   
 0.946
FGIG_03174
Tyrosine--tRNA ligase.
  
 0.945
FGIG_09351
Immature colon carcinoma transcript 1 protein.
  
 
 0.932
FGIG_02476
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
  
 0.928
FGIG_05292
Eukaryotic translation elongation factor 1 gamma.
   
 0.919
FGIG_05871
Glutaminyl(Q) Amino-acyl tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.918
FGIG_03872
Isoleucine--tRNA ligase.
  
 0.911
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.