STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03419Putative calcium-binding protein. (69 aa)    
Predicted Functional Partners:
FGIG_11539
Peripheral plasma membrane protein CASK.
    
 0.791
FGIG_11454
Peripheral plasma membrane protein CASK.
    
 0.791
FGIG_01947
Troponin T.
   
 0.714
FGIG_05992
Myosin-2.
   
 0.700
FGIG_00444
PDZ domain-containing protein.
   
 0.700
FGIG_03115
DNA repair protein.
    
 0.689
FGIG_10057
Serine/threonine-protein kinase DCLK2.
   
 0.682
FGIG_00210
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.638
FGIG_04172
Serine/threonine-protein phosphatase.
    
 0.636
FGIG_04278
Serine/threonine-protein phosphatase.
    
 0.636
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.