STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_02985Cleavage and polyadenylation specificity factor 1. (1557 aa)    
Predicted Functional Partners:
FGIG_06814
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.999
FGIG_11486
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.998
FGIG_09836
Endoribonuclease YSH1.
   
 0.998
FGIG_00671
Symplekin.
    
 0.997
FGIG_01496
E3 ubiquitin-protein ligase RBBP6.
    
 0.997
FGIG_02950
Putative histone H3 lys4 methyltransferase complex and rna cleavage factor ii complex subunit swd2.
    
 0.997
FGIG_09684
Cleavage and polyadenylation specificity factor subunit.
   
 0.995
FGIG_09683
Cleavage and polyadenylation specificity factor subunit.
   
 0.995
FGIG_05295
WD repeat-containing protein 33.
    
 0.994
FGIG_09246
WD repeat-containing protein 33.
    
 0.994
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.