STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_07046Uncharacterized protein. (97 aa)    
Predicted Functional Partners:
FGIG_10619
RNA polymerase-associated protein LEO1.
    
 0.972
FGIG_04116
Golgi to er traffic protein 4.
   
 0.942
FGIG_07398
ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]
   
 0.877
FGIG_07175
Putative sec61 protein translocation complex beta subunit.
    
 0.793
FGIG_07857
Putative uv excision repair protein rad23.
   
 0.778
FGIG_06883
UV excision repair protein RAD23 like protein B.
   
 0.778
FGIG_08056
Heat shock protein heat shock protein 90 alpha.
   
 0.760
FGIG_05381
Heat shock protein 75 mitochondrial.
   
 0.760
FGIG_05414
Parafibromin.
    
 0.755
FGIG_05927
RNA polymerase II-associated factor 1.
    
 0.750
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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