STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_11956Putative ptx1 protein. (166 aa)    
Predicted Functional Partners:
FGIG_12528
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
   
 
 0.957
FGIG_07882
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
   
 
 0.957
FGIG_01314
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.932
FGIG_10942
Protein sel-1 1.
   
 
 0.911
FGIG_06817
Putative extracellular protein sel-1.
   
 
 0.911
FGIG_12292
Mitochondrial tRNA-specific 2-thiouridylase 1.
  
 0.900
FGIG_06543
Putative oxidoreductase TDA3.
     
 0.764
FGIG_07464
D-aspartate oxidase.
     
 0.764
FGIG_03174
Tyrosine--tRNA ligase.
     
 0.697
FGIG_02186
Glutamyl tRNA synthetase cytoplasmic.
  
  
 0.668
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.