STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_12438Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
FGIG_04022
Ubiquitin carboxyl terminal hydrolase BAP1.
    
 0.883
FGIG_02585
Uncharacterized protein.
   
 0.813
FGIG_00980
Ubiquitin carboxyl-terminal hydrolase.
    
 0.793
FGIG_00882
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.737
FGIG_11908
Forkhead box protein K2.
   
 0.736
FGIG_08413
Guanylate kinase-like domain-containing protein.
    
 0.717
FGIG_01898
E3 ubiquitin-protein ligase mib1.
   
 0.704
FGIG_01896
E3 ubiquitin-protein ligase MIB2.
   
 0.704
FGIG_12672
Host cell factor 1.
    
 0.671
FGIG_08447
Host cell factor.
    
 0.671
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.