STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_10288Dual specificity protein kinase CLK2. (555 aa)    
Predicted Functional Partners:
FGIG_01317
Short chain enoyl-CoA hydratase.
 
      0.719
FGIG_03749
SRSF protein kinase 3.
    
 
0.578
FGIG_02067
Uncharacterized protein.
    
 
 0.578
FGIG_07493
Astacin like metallo-protease.
   
 
 0.503
FGIG_08390
Serine/arginine-rich splicing factor 2.
    
 
 0.496
FGIG_10677
Serine/arginine-rich splicing factor 11.
   
 
 0.490
FGIG_10161
Putative ATP-dependent RNA helicase YTHDC2.
   
 
 0.478
FGIG_07964
Putative ATP-dependent RNA helicase YTHDC2.
   
 
 0.478
FGIG_12372
tRNA selenocysteine 1 associated protein 1.
   
 
 0.462
FGIG_08916
PWI domain-containing protein.
    
 
 0.438
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.