STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_11764ER membrane protein complex subunit 3. (256 aa)    
Predicted Functional Partners:
FGIG_07519
ER membrane protein complex subunit 2-A.
   
 
 0.990
FGIG_05216
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.990
FGIG_04514
ER membrane protein complex subunit 1.
    
 
 0.987
FGIG_12275
Transmembrane protein 93.
   
 
 0.981
FGIG_08100
ER membrane protein complex subunit.
   
 
 0.977
FGIG_03352
Uncharacterized protein.
    
 
 0.969
FGIG_00332
Uncharacterized protein.
    
 
 0.966
FGIG_03668
Dynactin subunit 4.
    
 
 0.965
FGIG_11149
Ubiquitin protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.923
FGIG_05282
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.735
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.