STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_09792Vesicular acetylcholine transporter-A. (543 aa)    
Predicted Functional Partners:
FGIG_02172
HMG-CoA synthase.
     
 0.980
FGIG_11539
Peripheral plasma membrane protein CASK.
     
 0.970
FGIG_11454
Peripheral plasma membrane protein CASK.
     
 0.970
FGIG_10785
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.965
FGIG_09782
RAB3C member RAS oncogene family.
   
 
 0.901
FGIG_00463
Uncharacterized protein.
     
 0.824
FGIG_03330
Synaptic vesicular amine transporter.
  
  
 
0.812
FGIG_11788
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.755
FGIG_00255
Synaptotagmin II.
     
 0.752
FGIG_01145
Synaptotagmin-1.
     
 0.752
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.