STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_07391Putative Zinc finger protein. (1662 aa)    
Predicted Functional Partners:
FGIG_02731
SWI:SNF matrix associated.
    
 0.980
FGIG_06319
DNA polymerase epsilon subunit 3.
    
 
 0.950
FGIG_04733
Chromatin accessibility complex protein 1.
    
 
 0.793
FGIG_07927
Uncharacterized protein.
    
 0.788
FGIG_10930
Chromodomain-helicase-DNA-binding protein 1.
    
 0.788
FGIG_10298
Chromodomain-helicase-DNA-binding protein 1.
    
 0.788
FGIG_09279
Uncharacterized protein.
    
 0.788
FGIG_10211
HSA domain-containing protein.
    
 0.788
FGIG_00180
Chromodomain-helicase-DNA-binding protein 7.
   
 0.740
FGIG_03748
Chromodomain-helicase-DNA-binding protein 1.
   
 0.740
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.