STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_08889Uncharacterized protein. (290 aa)    
Predicted Functional Partners:
FGIG_04748
Pre-mRNA-splicing factor RBM22.
    
 0.714
FGIG_11801
Aryl hydrocarbon receptor nuclear translocator.
    
 0.676
FGIG_08711
Aryl hydrocarbon receptor nuclear translocator.
    
 0.676
FGIG_00916
Transcription factor EB.
    
 0.676
FGIG_08009
Glucose-regulated protein 94.
   
 0.676
FGIG_08145
Proteophosphoglycan 5.
    
 0.656
FGIG_01649
Nuclear receptor corepressor 1.
    
 0.656
FGIG_11053
Prostaglandin e synthase.
   
  0.652
FGIG_08056
Heat shock protein heat shock protein 90 alpha.
    
 0.636
FGIG_05381
Heat shock protein 75 mitochondrial.
    
 0.636
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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