STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_11254GTP-binding protein YchF. (306 aa)    
Predicted Functional Partners:
FGIG_10279
Uncharacterized protein.
  
 
 0.862
FGIG_05014
Adenylate kinase 9.
  
 
 0.862
FGIG_07830
Uncharacterized protein.
  
 
 0.862
FGIG_10774
Uncharacterized protein.
  
 
 0.862
FGIG_02556
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.850
FGIG_03174
Tyrosine--tRNA ligase.
  
  
 0.849
FGIG_05671
CTP synthase.
  
 
 0.836
FGIG_12695
CTP synthase.
  
 
 0.836
FGIG_04868
Methionyl tRNA synthetase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.834
FGIG_11288
Adenine phosphoribosyl transferase.
  
 
  0.826
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.