STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_02426TATA-box-binding protein. (153 aa)    
Predicted Functional Partners:
FGIG_04091
Transcription initiation factor TFIIB.
   
 0.998
FGIG_00723
Putative Transcription initiation factor.
    
 0.997
FGIG_01825
Putative Alpha(1 3)fucosyltransferase.
    
 0.997
FGIG_07737
Transcription initiation factor TFIID subunit 7.
    
 0.997
FGIG_12322
TAF11 RNA polymerase II TATA box binding protein (TBP)-associated factor.
   
 0.997
FGIG_01220
Transcription initiation factor TFIID subunit 6.
   
 0.997
FGIG_04481
Transcription initiation factor TFIID subunit 13.
   
 0.997
FGIG_06472
Transcription initiation factor TFIID subunit 1.
    
 0.997
FGIG_07330
Transcription initiation factor TFIID subunit 2.
    
 0.997
FGIG_03541
Transcription factor IIIB subunit.
   
 0.997
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.