STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03438POU domain protein. (954 aa)    
Predicted Functional Partners:
FGIG_09537
Homeotic protein spalt-major.
    
 0.843
FGIG_01102
SoxB protein.
    
 0.708
FGIG_02653
Transcription factor SOX-2.
    
 0.708
FGIG_03480
ANTP class homeobox transcription factor ANTP72.
   
 0.679
FGIG_01688
Uncharacterized protein.
    
  0.678
FGIG_11800
HMG box domain-containing protein.
    
 0.656
FGIG_00079
Arginine glutamic acid dipeptide RE repeat.
    
 
 0.655
FGIG_04091
Transcription initiation factor TFIIB.
    
 0.630
FGIG_00632
Pre-mRNA cleavage complex 2 protein Pcf11.
     
 0.629
FGIG_02426
TATA-box-binding protein.
   
 0.596
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.