STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_01077Protocadherin-1. (1777 aa)    
Predicted Functional Partners:
FGIG_05802
Armadillo repeat protein deleted in velo-cardio-facial syndrome protein.
    
 0.589
FGIG_03449
Uncharacterized protein.
    
 0.589
FGIG_12662
Vinculin.
    
 0.521
FGIG_02177
Vinculin-b.
    
 0.521
FGIG_02325
Catenin alpha-3.
    
 0.521
FGIG_09039
Armadillo segment polarity protein.
    
 0.516
FGIG_05872
Junction plakoglobin.
    
 0.516
FGIG_04339
Catenin (Cadherin-associated protein) beta 1.
    
 0.516
FGIG_05179
Uridine cytidine kinase 2.
    
 0.516
FGIG_03910
Uridine-cytidine kinase 1.
    
 0.516
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.