STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03998Uncharacterized protein. (1987 aa)    
Predicted Functional Partners:
FGIG_10645
Putative chromobox protein.
    
 0.861
FGIG_04114
E3 ubiquitin-protein ligase RING2-A.
    
 0.853
FGIG_05420
Polycomb group RING finger protein 4.
    
 0.844
FGIG_08148
Polycomb protein SCMH1.
    
 0.841
FGIG_12499
Putative tRNA pseudouridine synthase Pus10.
    
 0.764
FGIG_06985
Polycomb group RING finger protein 3.
    
 0.764
FGIG_06707
Scm protein containing 4 mbt domains (Sfmbt).
    
 0.756
FGIG_00853
Lethal(3)malignant brain tumor 3.
    
 0.756
FGIG_00376
Uncharacterized protein.
    
 0.755
FGIG_10619
RNA polymerase-associated protein LEO1.
   
  0.754
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.