STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_06143Calcium-activated potassium channel. (390 aa)    
Predicted Functional Partners:
FGIG_10508
Putative calcium-activated potassium channel alpha subunit.
 
      0.900
FGIG_03273
cAMP-dependent protein kinase catalytic subunit; Belongs to the protein kinase superfamily.
    
 0.586
FGIG_06125
cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.
    
 0.586
FGIG_12622
Protein kinase domain-containing protein.
    
 0.586
FGIG_07718
cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.
    
 0.586
FGIG_01338
cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.
    
 0.586
FGIG_11289
Uncharacterized protein.
     
 0.475
FGIG_04628
Small conductance calcium-activated potassium channel protein.
     
 0.475
FGIG_04629
Uncharacterized protein.
     
 0.475
FGIG_00123
Small conductance calcium-activated potassium channel protein 1.
     
 0.475
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.