STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_03635Peptidase_M22 domain-containing protein. (89 aa)    
Predicted Functional Partners:
FGIG_01806
Yrdc domain containing protein mitochondrial.
  
 
 0.861
FGIG_07002
Pseudouridine-5'-monophosphatase.
    
  0.573
FGIG_02186
Glutamyl tRNA synthetase cytoplasmic.
  
 
 0.520
FGIG_09351
Immature colon carcinoma transcript 1 protein.
   
 
 0.474
FGIG_05481
N-6 adenine-specific dna methyltransferase 1.
    
 0.460
FGIG_01038
Leucyl tRNA synthetase.
   
 
 0.447
FGIG_04310
Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.447
FGIG_08428
Uncharacterized protein.
    
   0.422
FGIG_11254
GTP-binding protein YchF.
  
  
 0.421
FGIG_03957
tRNA N6-adenosine threonylcarbamoyltransferase.
    
 
 0.412
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.