STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00656PHD finger protein 12. (833 aa)    
Predicted Functional Partners:
FGIG_00596
Mortality factor 4 protein 1.
    
 
 0.973
FGIG_00773
Paired amphipathic helix protein Sin3a.
   
 
 0.971
FGIG_06489
Male-specific lethal 3 1.
    
 
 0.960
FGIG_00122
GATA zinc finger domain-containing protein 1.
    
 
 0.948
FGIG_10688
Retinoblastoma binding protein 4.
    
 
 0.924
FGIG_03044
Histone-binding protein RBBP4.
    
 
 0.924
FGIG_03610
Lysine-specific demethylase 5D.
    
 
 0.890
FGIG_04080
BRCA2-interacting transcriptional repressor EMSY.
   
 
 0.860
FGIG_09253
Putative histone-lysine N-methyltransferase CG1716.
   
 
 0.781
FGIG_01407
Uncharacterized protein.
    
 
 0.735
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.