STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_10912Flagellar/basal body protein. (80 aa)    
Predicted Functional Partners:
FGIG_01120
Glutamate [NMDA] receptor subunit 1.
   
 0.717
FGIG_01268
Discs large 1 protein.
   
 0.666
FGIG_09486
Disks large 1.
   
 0.666
FGIG_08938
Disks large 1 tumor suppressor protein.
   
 0.666
FGIG_07823
Glutamate [NMDA] receptor subunit epsilon-2; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.615
FGIG_03697
Glutamate NMDA receptor subunit.
    
 0.615
FGIG_11871
Calmodulin mRNA; Belongs to the calmodulin family.
     
 0.546
FGIG_02477
Calcium-binding protein M.
   
 
  0.518
FGIG_11610
Neurocalcin-delta B.
   
 
  0.518
FGIG_02770
Phosphoinositide phospholipase C.
   
 
 0.517
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.