STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00801Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
FGIG_02351
UBX domain-containing protein 2.
    
 0.999
FGIG_02292
Fanconi anemia group M protein.
   
 0.999
FGIG_05297
Ubiquitin fusion degradation protein 1.
   
 0.989
FGIG_11723
Small subunit ribosomal protein S27Ae.
   
 0.965
FGIG_07516
Phospholipase A-2-activating protein.
   
 
 0.959
FGIG_11990
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
   
 0.957
FGIG_05065
AAA family ATPase.
   
 0.957
FGIG_04184
Ubiquitin thioesterase OTU1.
    
 
 0.938
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.923
FGIG_10253
DNA excision repair protein ERCC-1.
    
 0.918
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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