STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_02558CWF19 1 cell cycle control. (590 aa)    
Predicted Functional Partners:
FGIG_04220
Cell division cycle 5 protein.
   
 
 0.936
FGIG_00748
Lariat debranching enzyme.
   
 
 0.821
FGIG_11083
SSXT domain-containing protein.
      
 0.581
FGIG_10822
Uncharacterized protein.
    
   0.520
FGIG_10821
U2 small nuclear ribonucleoprotein A.
    
   0.520
FGIG_06162
Pre-mRNA-processing factor 19.
   
 
 0.513
FGIG_01147
Pre-mRNA-splicing factor syf2.
    
   0.489
FGIG_05431
Cell cycle control protein cwf14.
    
 
 0.438
FGIG_06092
Leucine rich repeat containing protein 51.
    
   0.430
FGIG_06253
CWF19 protein 2.
    
 
 0.420
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.