STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_00840Uncharacterized protein. (236 aa)    
Predicted Functional Partners:
FGIG_04100
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.925
FGIG_02421
Uncharacterized protein.
   
 0.919
FGIG_04311
Ubiquitin-conjugating enzyme E2 Z.
   
 0.850
FGIG_05297
Ubiquitin fusion degradation protein 1.
    
 
 0.800
FGIG_04184
Ubiquitin thioesterase OTU1.
    
 
 0.782
FGIG_05472
Coronin; Belongs to the WD repeat coronin family.
     
 0.753
FGIG_07061
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.709
FGIG_05612
Ubiquitin-conjugating enzyme E2 O.
   
 0.687
FGIG_11990
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
   
 
 0.651
FGIG_10185
UBA domain-containing protein.
    
 0.650
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.