STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_12195Uncharacterized protein. (276 aa)    
Predicted Functional Partners:
FGIG_09009
SecY translocase.
   
 0.930
FGIG_00936
Cytochrome c oxidase subunit XV assembly.
     
 0.767
FGIG_01548
Signal recognition particle receptor subunit alpha.
   
 
 0.756
FGIG_08784
Large subunit ribosomal protein L45.
   
 
 0.733
FGIG_11687
Mitochondrial inner membrane protein OXA1L.
   
 
 0.727
FGIG_12050
Uncharacterized protein.
    
 
 0.707
FGIG_08535
Signal recognition particle 54 kDa protein.
   
 0.695
FGIG_12451
Signal recognition particle 54 kDa protein.
   
 0.695
FGIG_10554
Uncharacterized protein.
    
 
 0.688
FGIG_09351
Immature colon carcinoma transcript 1 protein.
  
 
 0.672
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.