STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_02953YTH domain-containing protein. (818 aa)    
Predicted Functional Partners:
FGIG_06455
CCR4-NOT transcription complex subunit 7.
    
 
 0.633
FGIG_01524
RNA-binding protein 26.
    
 
 0.535
FGIG_08058
CNOT4.
   
 
 0.496
FGIG_02033
N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family.
      
 0.474
FGIG_00067
RNA recognition motif RNP 1.
    
 
 0.449
FGIG_06645
Polyadenylate-binding protein 2.
    
 
 0.449
FGIG_10161
Putative ATP-dependent RNA helicase YTHDC2.
    
 
 0.445
FGIG_07964
Putative ATP-dependent RNA helicase YTHDC2.
    
 
 0.445
FGIG_02149
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
      
 0.431
FGIG_07230
Superkiller viralicidic activity 2 2.
    
 
 0.411
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.