STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_01844Cystathionine beta-synthase. (181 aa)    
Predicted Functional Partners:
FGIG_04323
Putative cystathionine gamma-lyase 2.
  
 0.988
FGIG_01843
Cystathionine beta-synthase.
 
     0.944
FGIG_12001
Homocysteine S-methyltransferase.
  
 
 0.927
FGIG_10407
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.920
FGIG_08269
Serine hydroxymethyltransferase.
  
 
 0.920
FGIG_06786
Adenosylhomocysteinase.
  
 0.920
FGIG_02186
Glutamyl tRNA synthetase cytoplasmic.
  
 0.918
FGIG_04600
Phosphoserine phosphatase SerB.
    
 0.918
FGIG_06672
Serine dehydratase.
 
  
 0.908
FGIG_02822
Adenosylhomocysteinase.
  
 0.885
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.